Braak stage 1, 100% of pigmented neurons left
parkinsonconnecting

Gene record

VPS29

VPS29 retromer complex component

translation score 0.48, read 2026-10-24; 1 sealed predictions, 0 held; 2 receipts.

Six readers

readerfoundscore
genetics
Open Targets
no genetic evidence; overall 0.01 from other evidence0.00
cell type
Human Protein Atlas
expressed broadly, no clear home in brain cells0.40
chemistry
Open Targets
a small-molecule pocket0.60
trials
ClinicalTrials.gov
no Parkinson's trials on record: an open field1.00
literature
PubMed
19 Parkinson's papers of 1750.61
pathways
Reactome
1 pathway; mostly vesicle traffic1.00

No case: the score is under the bar. Receipt 9017

Sealed predictions

  1. VPS29 in dopamine neurons, braak+0.68 (p 0.043) → +0.24 (p 0.533)receipt 9025

Swarm cases

receipt 9025: VPS29 in dopamine neurons, braak

power
full sample +0.53 (p 0.023, n 18), 95% CI +0.09 to +0.80. the interval excludes zero: something may be there, smaller than a half can see.
confounder
adjusted for sex: +0.53 (p 0.023, n 18). holds up.
composition
dopamine neurons share of nuclei vs axis +0.05 (p 0.854); controlling for it: +0.54 (p 0.020, n 18). not the mix.
skeptic
leave-one-out range +0.47 to +0.64, sign flips 0; without severely affected donors +0.53 (p 0.023, n 18). robust.
cell type
no other cell group does better.
axis
no measure beats "tracks Braak Lewy-body stage" for VPS29 in dopamine neurons.

case closed: nothing better to follow up.

Receipts

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